Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM14B ENSBTAG00000021558

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Description

LSM family member 14B [Source:VGNC Symbol;Acc:VGNC:111260]

Location

Primary_assembly 13: 55,063,256-55,072,305 reverse strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 4 transcripts (splice variants), 280 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000028723.7	LSM14B-201	1488	424aa	ENSBTAP00000028723.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BEY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000104146.1	LSM14B-202	1444	398aa	ENSBTAP00000088428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSV5	-
ENSBTAT00000094645.1	LSM14B-203	1408	385aa	ENSBTAP00000093080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAP4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000123086.1	LSM14B-204	859	220aa	ENSBTAP00000088648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZ46	-

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Summary

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