Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL3A1 ENSBTAG00000021466

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Description

collagen type III alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:27565]

Location

Primary_assembly 2: 7,375,289-7,414,912 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 3 transcripts (splice variants), 108 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000028617.6	COL3A1-201	5405	1466aa	ENSBTAP00000028617.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08E14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000149988.1	COL3A1-202	5306	1433aa	ENSBTAP00000107245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000107309.1	COL3A1-203	5192	1395aa	ENSBTAP00000102677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZI5	-

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Summary

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