Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PGLYRP3 ENSBTAG00000021443

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Description

peptidoglycan recognition protein 3 [Source:VGNC Symbol;Acc:VGNC:55653]

Location

Primary_assembly 3: 17,147,548-17,170,012 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 93 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000028587.7	PGLYRP3-205	5444	443aa	ENSBTAP00000028587.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BJ76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000144799.1	PGLYRP3-201	5137	377aa	ENSBTAP00000106902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000143395.1	PGLYRP3-204	5010	341aa	ENSBTAP00000107394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SY19	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000108458.2	PGLYRP3-203	2180	362aa	ENSBTAP00000089605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9ST59	-
ENSBTAT00000078335.3	PGLYRP3-202	1208	354aa	ENSBTAP00000063937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1U5	-

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Summary

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