Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
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Gene: SSR4 ENSBTAG00000021421

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Description

signal sequence receptor subunit 4 [Source:VGNC Symbol;Acc:VGNC:35322]

Location

Primary_assembly X: 37,011,240-37,015,526 forward strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 4 transcripts (splice variants) and 195 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000088811.2	SSR4-201	810	185aa	ENSBTAP00000102205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TUB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000115913.2	SSR4-202	683	148aa	ENSBTAP00000077714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYM8	-
ENSBTAT00000028556.6	SSR4-203	590	170aa	ENSBTAP00000028556.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z993	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000086614.3	SSR4-204	560	168aa	ENSBTAP00000060119.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LSB2	-

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Summary

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