Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
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Gene: PELP1 ENSBTAG00000018315

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Description

proline, glutamate and leucine rich protein 1 [Source:VGNC Symbol;Acc:VGNC:32744]

Location

Primary_assembly 19: 26,621,449-26,669,709 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants) and 112 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000028337.8	PELP1-204	3897	1217aa	ENSBTAP00000028337.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000122570.2	PELP1-201	3643	1179aa	ENSBTAP00000075987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RT44	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000086331.3	PELP1-202	3535	1143aa	ENSBTAP00000072242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDL1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000101374.2	PELP1-205	3381	1059aa	ENSBTAP00000076863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZS9	-
ENSBTAT00000089935.2	PELP1-203	3351	1035aa	ENSBTAP00000096959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEC2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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