Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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ID History
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Gene: NOPCHAP1 ENSBTAG00000021196

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Description

NOP protein chaperone 1 [Source:VGNC Symbol;Acc:VGNC:49162]

Gene Synonyms

C5H12ORF45

Location

Primary_assembly 5: 68,527,998-68,539,158 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 6 transcripts (splice variants) and 102 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000130490.2	NOPCHAP1-205	3521	231aa	ENSBTAP00000085445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000028244.5	NOPCHAP1-203	3259	192aa	ENSBTAP00000028244.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2TBJ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000095441.2	NOPCHAP1-206	3184	185aa	ENSBTAP00000092906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T7Z0	-
ENSBTAT00000106644.2	NOPCHAP1-202	886	195aa	ENSBTAP00000093219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9C3	-
ENSBTAT00000103318.2	NOPCHAP1-204	827	190aa	ENSBTAP00000096794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TF94	-
ENSBTAT00000074941.3	NOPCHAP1-201	383	67aa	ENSBTAP00000074592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJM5	-

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Summary

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