Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HCFC2 ENSBTAG00000020933

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Description

host cell factor C2 [Source:VGNC Symbol;Acc:VGNC:29773]

Location

Primary_assembly 5: 67,711,427-67,793,933 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 6 transcripts (splice variants), 139 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000140093.1	HCFC2-206	3450	817aa	ENSBTAP00000104125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000027882.6	HCFC2-203	5396	792aa	ENSBTAP00000027882.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BEJ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000088920.1	HCFC2-204	5252	744aa	ENSBTAP00000095024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TE25	-
ENSBTAT00000134260.1	HCFC2-205	3047	785aa	ENSBTAP00000082598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJ49	-
ENSBTAT00000081561.3	HCFC2-201	2804	798aa	ENSBTAP00000061977.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXN7	-
ENSBTAT00000154837.1	HCFC2-202	2417	746aa	ENSBTAP00000106264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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