Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP4 ENSBTAG00000020884

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Description

caspase 4, apoptosis-related cysteine peptidase [Source:NCBI gene (formerly Entrezgene);Acc:338039]

Gene Synonyms

CASP13

Location

Primary_assembly 15: 3,249,849-3,269,687 forward strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 3 transcripts (splice variants), 430 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027820.5	CASP4-201	2388	446aa	ENSBTAP00000027820.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z8F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000116406.1	CASP4-202	2133	361aa	ENSBTAP00000087618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMN6	-
ENSBTAT00000052006.4	CASP4-203	962	320aa	ENSBTAP00000052549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N5A8	-

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Summary

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