Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF3A ENSBTAG00000020858

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Description

UPF3A regulator of nonsense mediated mRNA decay [Source:VGNC Symbol;Acc:VGNC:36682]

Location

Primary_assembly 12: 87,064,203-87,083,105 forward strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000089864.1	UPF3A-201	1458	476aa	ENSBTAP00000095521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000027791.7	UPF3A-203	2418	473aa	ENSBTAP00000027791.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGC9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000113218.1	UPF3A-202	1362	444aa	ENSBTAP00000074715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSS7	-

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Summary

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