Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG1 ENSBTAG00000020735

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Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:VGNC Symbol;Acc:VGNC:35010]

Location

Primary_assembly 25: 16,448,218-16,543,620 reverse strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 2 transcripts (splice variants), 226 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094732.1	SMG1-202	11901	3658aa	ENSBTAP00000098322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TMV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000027632.6	SMG1-201	11865	3646aa	ENSBTAP00000027632.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBL6	-

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Summary

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