Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VAMP4 ENSBTAG00000020591

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Description

vesicle associated membrane protein 4 [Source:VGNC Symbol;Acc:VGNC:36758]

Location

Primary_assembly 16: 39,145,026-39,171,438 reverse strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094060.1	VAMP4-201	1906	141aa	ENSBTAP00000102910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32L97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000111147.1	VAMP4-204	1150	127aa	ENSBTAP00000103616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U0V8	-
ENSBTAT00000071023.2	VAMP4-203	934	135aa	ENSBTAP00000069106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7AHD7	-
ENSBTAT00000027435.5	VAMP4-202	886	140aa	ENSBTAP00000027435.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z805	-

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Summary

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