Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLPTM1 ENSBTAG00000020560

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Description

CLPTM1 regulator of GABA type A receptor forward trafficking [Source:VGNC Symbol;Acc:VGNC:27460]

Location

Primary_assembly 18: 52,658,703-52,691,345 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027395.7	CLPTM1-202	2479	670aa	ENSBTAP00000027395.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2NL17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000136143.1	CLPTM1-203	2670	568aa	ENSBTAP00000104037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000130295.1	CLPTM1-201	2394	624aa	ENSBTAP00000084372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SG75	-

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Summary

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