Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UPK1A ENSBTAG00000020543

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Description

uroplakin 1A [Source:VGNC Symbol;Acc:VGNC:36684]

Location

Primary_assembly 18: 46,395,914-46,405,033 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 3 transcripts (splice variants), 141 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000129024.1	UPK1A-201	1942	467aa	ENSBTAP00000096887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TIE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000133918.2	UPK1A-202	1586	273aa	ENSBTAP00000101217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVN7	-
ENSBTAT00000027372.7	UPK1A-203	1303	245aa	ENSBTAP00000027372.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N7A6	-

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Summary

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