Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
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ID History
- Gene history

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Gene: VIPAS39 ENSBTAG00000020475

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Description

VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:VGNC Symbol;Acc:VGNC:36798]

Location

Primary_assembly 10: 88,621,503-88,645,246 reverse strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 6 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083645.3	VIPAS39-201	2534	515aa	ENSBTAP00000070149.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M8C6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000103332.1	VIPAS39-202	2378	463aa	ENSBTAP00000093603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9Q1	-
ENSBTAT00000129824.1	VIPAS39-203	2375	462aa	ENSBTAP00000088366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSQ3	-
ENSBTAT00000027283.7	VIPAS39-204	2372	461aa	ENSBTAP00000027283.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z7U7	-
ENSBTAT00000082493.2	VIPAS39-205	2336	449aa	ENSBTAP00000072210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MM76	-
ENSBTAT00000097377.1	VIPAS39-206	2321	444aa	ENSBTAP00000095045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDS4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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