Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM5A ENSBTAG00000020472

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Description

lysine demethylase 5A [Source:VGNC Symbol;Acc:VGNC:30530]

Location

Primary_assembly 5: 107,228,265-107,290,574 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 6 transcripts (splice variants), 223 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000134048.1	KDM5A-202	6487	1690aa	ENSBTAP00000089871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SX17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132259.1	KDM5A-203	6349	1644aa	ENSBTAP00000076734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RWE8	-
ENSBTAT00000115857.1	KDM5A-201	6304	1637aa	ENSBTAP00000081634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6L6	-
ENSBTAT00000080240.2	KDM5A-205	5213	1632aa	ENSBTAP00000072217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDI8	-
ENSBTAT00000027280.7	KDM5A-204	5171	1636aa	ENSBTAP00000027280.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQ59	-
ENSBTAT00000071767.2	KDM5A-206	5148	1641aa	ENSBTAP00000061445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MZ57	-

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Summary

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