Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC66A3 ENSBTAG00000020297

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Description

solute carrier family 66 member 3 [Source:VGNC Symbol;Acc:VGNC:33281]

Gene Synonyms

PQLC3

Location

Primary_assembly 11: 86,608,490-86,632,710 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000107078.1	SLC66A3-201	868	254aa	ENSBTAP00000091025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000027051.6	SLC66A3-202	1708	230aa	ENSBTAP00000027051.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000114959.1	SLC66A3-203	711	201aa	ENSBTAP00000083077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCG2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000113546.1	SLC66A3-205	682	187aa	ENSBTAP00000103128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TWV5	-
ENSBTAT00000098212.1	SLC66A3-204	465	119aa	ENSBTAP00000098959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKP1	-

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Summary

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