Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DCLRE1A ENSBTAG00000020193

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Description

DNA cross-link repair 1A [Source:VGNC Symbol;Acc:VGNC:27916]

Location

Primary_assembly 26: 34,281,664-34,306,692 reverse strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000026896.5	DCLRE1A-205	3648	1068aa	ENSBTAP00000026896.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BN11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000126897.2	DCLRE1A-202	4052	1051aa	ENSBTAP00000103973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZA4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000099910.1	DCLRE1A-203	3945	1056aa	ENSBTAP00000097786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGX3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000106669.1	DCLRE1A-201	3883	949aa	ENSBTAP00000079936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S217	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000092513.1	DCLRE1A-204	3646	961aa	ENSBTAP00000095377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEJ9	-

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Summary

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