Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLMP ENSBTAG00000020046

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Description

CXADR like membrane protein [Source:VGNC Symbol;Acc:VGNC:50091]

Location

Primary_assembly 15: 33,689,099-33,794,265 reverse strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 393 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000107997.1	CLMP-202	2038	395aa	ENSBTAP00000095587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TF18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000026710.8	CLMP-204	2091	373aa	ENSBTAP00000026710.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DME5 A5D7I8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000072699.3	CLMP-203	1978	378aa	ENSBTAP00000061630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LW24	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000127068.1	CLMP-201	1970	389aa	ENSBTAP00000084205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFQ6	-

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Summary

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