Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN22 ENSBTAG00000019617

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Description

protein tyrosine phosphatase non-receptor type 22 [Source:VGNC Symbol;Acc:VGNC:33536]

Location

Primary_assembly 3: 29,519,899-29,578,358 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 3 transcripts (splice variants), 126 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000026136.8	PTPN22-202	2477	795aa	ENSBTAP00000026136.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000123654.2	PTPN22-203	4815	775aa	ENSBTAP00000089489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1F7	-
ENSBTAT00000088360.2	PTPN22-201	629	179aa	ENSBTAP00000087805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SUI4	-

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Summary

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