Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGA3 ENSBTAG00000019498

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Description

integrin subunit alpha 3 [Source:VGNC Symbol;Acc:VGNC:30315]

Location

Primary_assembly 19: 36,565,806-36,598,451 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 4 transcripts (splice variants), 283 orthologues, 17 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025974.6	ITGA3-203	3530	1065aa	ENSBTAP00000025974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000054196.4	ITGA3-201	4907	1055aa	ENSBTAP00000050366.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZJJ6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000133435.1	ITGA3-202	4805	1021aa	ENSBTAP00000083202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHJ6	-
ENSBTAT00000057592.2	ITGA3-204	1844	410aa	ENSBTAP00000047798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQN8	-

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Summary

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