Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDH9 ENSBTAG00000019340

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Description

protocadherin 9 [Source:UniProtKB Gene Name;Acc:A0AAA9T9P7]

Location

Primary_assembly 12: 39,462,055-40,602,915 reverse strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025758.7	PCDH9-202	3913	1237aa	ENSBTAP00000025758.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000093828.1	PCDH9-201	3612	1203aa	ENSBTAP00000093360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9P7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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