Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: WASHC2C ENSBTAG00000018915

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Description

WASH complex subunit 2C [Source:NCBI gene (formerly Entrezgene);Acc:513740]

Gene Synonyms

FAM21A, WASHC2A

Location

Primary_assembly 28: 44,112,870-44,157,808 forward strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 5 transcripts (splice variants), 191 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025173.6	WASHC2C-201	4309	1333aa	ENSBTAP00000025173.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000116982.2	WASHC2C-203	4242	1312aa	ENSBTAP00000103040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U0B8	-
ENSBTAT00000107767.2	WASHC2C-202	4123	1271aa	ENSBTAP00000091902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZK8	-
ENSBTAT00000113177.2	WASHC2C-204	4014	1236aa	ENSBTAP00000090389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYE5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000136019.2	WASHC2C-205	3952	1254aa	ENSBTAP00000086813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRW1	-

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Summary

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