Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CMC1 ENSBTAG00000035286

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Description

C-X9-C motif containing 1 [Source:VGNC Symbol;Acc:VGNC:27478]

Location

Primary_assembly 22: 2,675,935-2,757,391 forward strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 5 transcripts (splice variants) and 131 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000112730.2	CMC1-201	5839	216aa	ENSBTAP00000101243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000109911.2	CMC1-202	5585	144aa	ENSBTAP00000093272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TB39	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000129760.2	CMC1-205	5557	105aa	ENSBTAP00000102855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U123	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000025040.7	CMC1-204	5220	76aa	ENSBTAP00000025040.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z613	-
ENSBTAT00000140853.1	CMC1-203	1076	105aa	ENSBTAP00000107317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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