Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: HP1BP3 ENSBTAG00000018656

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Description

heterochromatin protein 1 binding protein 3 [Source:VGNC Symbol;Acc:VGNC:29935]

Location

Primary_assembly 2: 131,855,206-131,892,004 forward strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 3 transcripts (splice variants) and 252 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000024825.6	HP1BP3-203	3673	555aa	ENSBTAP00000024825.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08DU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000076273.3	HP1BP3-201	3389	554aa	ENSBTAP00000068482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7AG50	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000136547.1	HP1BP3-202	3190	515aa	ENSBTAP00000107277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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