Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: JCHAIN ENSBTAG00000018531

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Description

joining chain of multimeric IgA and IgM [Source:VGNC Symbol;Acc:VGNC:30373]

Location

Primary_assembly 6: 86,032,997-86,071,595 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 6 transcripts (splice variants) and 125 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000123144.1	JCHAIN-202	1543	214aa	ENSBTAP00000082577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000113259.2	JCHAIN-203	1483	194aa	ENSBTAP00000086249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQF7	-
ENSBTAT00000134951.1	JCHAIN-201	1444	181aa	ENSBTAP00000091526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1E6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000024666.7	JCHAIN-204	1408	169aa	ENSBTAP00000024666.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PXA6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000097391.1	JCHAIN-205	1396	165aa	ENSBTAP00000078752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYV6	-
ENSBTAT00000122068.2	JCHAIN-206	1293	165aa	ENSBTAP00000089899.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T056	-

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Summary

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