Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BBOF1 ENSBTAG00000018467

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Description

basal body orientation factor 1 [Source:VGNC Symbol;Acc:VGNC:26431]

Location

Primary_assembly 10: 85,384,651-85,433,199 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 3 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000137706.1	BBOF1-202	3214	535aa	ENSBTAP00000106244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000024578.7	BBOF1-203	3156	535aa	ENSBTAP00000024578.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N7L8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000142267.1	BBOF1-201	708	210aa	ENSBTAP00000106329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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