Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CRLF3 ENSBTAG00000018381

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Description

cytokine receptor like factor 3 [Source:VGNC Symbol;Acc:VGNC:27718]

Location

Primary_assembly 19: 18,096,349-18,149,751 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 9 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000024457.8	CRLF3-202	2634	452aa	ENSBTAP00000024457.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BCF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000091859.2	CRLF3-208	2720	420aa	ENSBTAP00000080037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S2A2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000097969.2	CRLF3-203	2692	408aa	ENSBTAP00000074798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYA1	-
ENSBTAT00000112995.2	CRLF3-201	2685	443aa	ENSBTAP00000096933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKX6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000089201.2	CRLF3-207	2648	409aa	ENSBTAP00000085013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQ10	-
ENSBTAT00000094575.2	CRLF3-209	2564	404aa	ENSBTAP00000086383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQZ2	-
ENSBTAT00000132734.2	CRLF3-206	2561	450aa	ENSBTAP00000096531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEI7	-
ENSBTAT00000103737.2	CRLF3-204	2548	402aa	ENSBTAP00000076771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUC7	-
ENSBTAT00000118851.2	CRLF3-205	2541	401aa	ENSBTAP00000075828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSX0	-

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Summary

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