Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
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- GO: Anatomical entity
Phenotypes
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ID History
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Gene: TMEM175 ENSBTAG00000018379

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Description

transmembrane protein 175 [Source:VGNC Symbol;Acc:VGNC:35999]

Location

Primary_assembly 6: 117,410,539-117,431,827 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 5 transcripts (splice variants) and 190 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000099790.1	TMEM175-201	2982	606aa	ENSBTAP00000080801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SBF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000024455.7	TMEM175-205	2950	533aa	ENSBTAP00000024455.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T8A0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000104826.1	TMEM175-202	2802	546aa	ENSBTAP00000082937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SA27	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000082312.2	TMEM175-204	2783	491aa	ENSBTAP00000066566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M817	-
ENSBTAT00000116460.1	TMEM175-203	2760	532aa	ENSBTAP00000101158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TX36	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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