Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SKA1 ENSBTAG00000018216

.

Description

spindle and kinetochore associated complex subunit 1 [Source:VGNC Symbol;Acc:VGNC:34643]

Location

Primary_assembly 24: 49,964,083-49,996,484 forward strand.

ARS-UCD2.0:CM008191.2

About this gene

This gene has 4 transcripts (splice variants) and 97 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000024245.7	SKA1-201	1087	303aa	ENSBTAP00000024245.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAX9XTH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000074446.2	SKA1-202	1114	269aa	ENSBTAP00000070061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NEK5	-
ENSBTAT00000129508.2	SKA1-204	1001	261aa	ENSBTAP00000084472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SGI4	-
ENSBTAT00000106680.1	SKA1-203	931	208aa	ENSBTAP00000075720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RX30	-

.

Summary

.

.