Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB1 ENSBTAG00000018103

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Description

high mobility group box 1 [Source:VGNC Symbol;Acc:VGNC:53816]

Location

Primary_assembly 12: 30,324,744-30,332,930 forward strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 2 transcripts (splice variants), 233 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000024094.6	HMGB1-202	1267	215aa	ENSBTAP00000024094.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P10103	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000118995.2	HMGB1-201	695	158aa	ENSBTAP00000096329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDX6	-

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Summary

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