Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF25 ENSBTAG00000018003

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Description

Rho guanine nucleotide exchange factor 25 [Source:VGNC Symbol;Acc:VGNC:26112]

Location

Primary_assembly 5: 55,872,522-55,879,740 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000144512.1	ARHGEF25-201	2523	657aa	ENSBTAP00000106474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000072165.2	ARHGEF25-202	2292	580aa	ENSBTAP00000066043.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N6F4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000023960.7	ARHGEF25-204	2260	619aa	ENSBTAP00000023960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MWU7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000073998.2	ARHGEF25-203	2196	548aa	ENSBTAP00000072292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MR77	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000074738.2	ARHGEF25-205	2170	589aa	ENSBTAP00000060285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKU4	-

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Summary

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