Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC39A9 ENSBTAG00000017811

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Description

solute carrier family 39 member 9 [Source:VGNC Symbol;Acc:VGNC:34869]

Location

Primary_assembly 10: 81,185,428-81,230,614 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000124421.2	SLC39A9-202	5191	368aa	ENSBTAP00000096183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000023676.7	SLC39A9-203	5026	313aa	ENSBTAP00000023676.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MY37	-
ENSBTAT00000098983.2	SLC39A9-204	4957	290aa	ENSBTAP00000082420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIQ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000101115.2	SLC39A9-205	4828	247aa	ENSBTAP00000101992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXR0	-
ENSBTAT00000087743.2	SLC39A9-201	1420	285aa	ENSBTAP00000080926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6W3	-

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Summary

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