Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTGIS ENSBTAG00000017537

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Description

prostaglandin I2 synthase [Source:VGNC Symbol;Acc:VGNC:33509]

Gene Synonyms

CYP8A1

Location

Primary_assembly 13: 77,586,772-77,640,568 reverse strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 7 transcripts (splice variants), 251 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000023313.6	PTGIS-207	2281	525aa	ENSBTAP00000023313.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z3X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000134517.1	PTGIS-206	2411	509aa	ENSBTAP00000079259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5Z5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000131555.1	PTGIS-204	2285	467aa	ENSBTAP00000085820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SPG1	-
ENSBTAT00000118320.1	PTGIS-205	2155	490aa	ENSBTAP00000091350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T4B2	-
ENSBTAT00000085597.2	PTGIS-203	2087	512aa	ENSBTAP00000057920.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MTF6	-
ENSBTAT00000148045.1	PTGIS-202	1849	499aa	ENSBTAP00000106807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000081633.2	PTGIS-201	1570	505aa	ENSBTAP00000063858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M264	-

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Summary

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