Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC16A3 ENSBTAG00000017461

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Description

solute carrier family 16 member 3 [Source:VGNC Symbol;Acc:VGNC:34689]

Location

Primary_assembly 19: 50,634,317-50,648,901 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 4 transcripts (splice variants), 295 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000023209.7	SLC16A3-203	2703	537aa	ENSBTAP00000023209.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MXZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000066453.2	SLC16A3-204	2508	472aa	ENSBTAP00000064647.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N4D0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000102926.1	SLC16A3-201	2106	435aa	ENSBTAP00000103167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1P6	-
ENSBTAT00000109511.1	SLC16A3-202	2040	413aa	ENSBTAP00000087577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQD6	-

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Summary

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