Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VBP1 ENSBTAG00000017265

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Description

VHL binding protein 1 [Source:VGNC Symbol;Acc:VGNC:36777]

Location

Primary_assembly X: 35,772,832-35,863,317 reverse strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 6 transcripts (splice variants), 219 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000092855.1	VBP1-205	2204	587aa	ENSBTAP00000087738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000108913.1	VBP1-206	1133	250aa	ENSBTAP00000088082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SV73	-
ENSBTAT00000096808.1	VBP1-201	940	205aa	ENSBTAP00000097396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJR6	-
ENSBTAT00000089122.1	VBP1-203	784	233aa	ENSBTAP00000103190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXX2	-
ENSBTAT00000126968.1	VBP1-202	738	190aa	ENSBTAP00000084056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SD64	-
ENSBTAT00000022946.5	VBP1-204	612	186aa	ENSBTAP00000022946.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5E5K1	-

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Summary

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