Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTSS ENSBTAG00000017135

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Description

cathepsin S [Source:VGNC Symbol;Acc:VGNC:27818]

Location

Primary_assembly 3: 19,981,414-20,004,545 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 7 transcripts (splice variants), 269 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000022774.5	CTSS-201	1893	382aa	ENSBTAP00000022774.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z3H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000096123.2	CTSS-205	1669	281aa	ENSBTAP00000089951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0P6	-
ENSBTAT00000107245.2	CTSS-206	1591	255aa	ENSBTAP00000085897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SPN6	-
ENSBTAT00000104032.2	CTSS-207	1436	240aa	ENSBTAP00000080625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5X9	-
ENSBTAT00000125539.2	CTSS-204	1040	310aa	ENSBTAP00000100269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TUL9	-
ENSBTAT00000097359.2	CTSS-202	785	224aa	ENSBTAP00000100536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQ91	-
ENSBTAT00000122794.2	CTSS-203	758	215aa	ENSBTAP00000085451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNA8	-

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Summary

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