Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USF2 ENSBTAG00000017035

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Description

upstream transcription factor 2, c-fos interacting [Source:VGNC Symbol;Acc:VGNC:111281]

Location

Primary_assembly 18: 45,981,896-45,992,232 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 4 transcripts (splice variants), 243 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000022650.6	USF2-202	1743	346aa	ENSBTAP00000022650.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QPY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000077944.3	USF2-201	1755	337aa	ENSBTAP00000062693.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LR26	-
ENSBTAT00000097763.2	USF2-203	1542	279aa	ENSBTAP00000095058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T8J3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000089813.2	USF2-204	1350	215aa	ENSBTAP00000093679.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T709	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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