Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SETD1B ENSBTAG00000004172

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Description

SET domain containing 1B, histone lysine methyltransferase [Source:VGNC Symbol;Acc:VGNC:50140]

Location

Primary_assembly 17: 53,476,991-53,499,853 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 3 transcripts (splice variants), 214 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000135263.1	SETD1B-203	7330	2070aa	ENSBTAP00000090266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3J6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000022553.7	SETD1B-201	7101	1966aa	ENSBTAP00000022553.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6Y5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000127901.1	SETD1B-202	6932	1849aa	ENSBTAP00000091567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T4X9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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