Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SRPK1 ENSBTAG00000016838

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Description

SRSF protein kinase 1 [Source:VGNC Symbol;Acc:VGNC:54238]

Location

Primary_assembly 23: 9,786,870-9,859,592 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 4 transcripts (splice variants), 226 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133045.1	SRPK1-204	3324	707aa	ENSBTAP00000093945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T593	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000111570.1	SRPK1-203	3261	686aa	ENSBTAP00000086422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMA6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000130484.1	SRPK1-201	3163	647aa	ENSBTAP00000075998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RT51	-
ENSBTAT00000022396.8	SRPK1-202	3080	655aa	ENSBTAP00000022396.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BNV4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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