Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBA1 ENSBTAG00000016764

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Description

ubiquitin like modifier activating enzyme 1 [Source:VGNC Symbol;Acc:VGNC:36561]

Location

Primary_assembly X: 85,565,557-85,586,823 forward strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 6 transcripts (splice variants), 187 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000095856.1	UBA1-201	4027	1167aa	ENSBTAP00000085747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000150065.1	UBA1-205	4805	1058aa	ENSBTAP00000106895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KMV5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000138568.1	UBA1-206	4613	994aa	ENSBTAP00000104455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000098366.1	UBA1-203	3652	1087aa	ENSBTAP00000097377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TFN9	-
ENSBTAT00000079106.2	UBA1-202	3588	1074aa	ENSBTAP00000057326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKR8	-
ENSBTAT00000022299.7	UBA1-204	3568	1059aa	ENSBTAP00000022299.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z3Q2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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