Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
- Gene history

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Gene: C1H3orf52 ENSBTAG00000016554

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Description

chromosome 1 C3orf52 homolog [Source:VGNC Symbol;Acc:VGNC:52666]

Location

Primary_assembly 1: 56,882,903-56,925,555 forward strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 3 transcripts (splice variants) and 116 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000115745.2	C1H3orf52-201	1869	266aa	ENSBTAP00000099071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TP83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000121487.2	C1H3orf52-202	2180	238aa	ENSBTAP00000097537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKQ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000022018.7	C1H3orf52-203	511	147aa	ENSBTAP00000022018.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B7W5	-

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Summary

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