Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Gene: RRP7 ENSBTAG00000016510

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Description

ribosomal RNA processing 7 homolog [Source:VGNC Symbol;Acc:VGNC:96875]

Location

Primary_assembly 5: 113,436,161-113,444,236 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 3 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074559.2	RRP7-203	2071	259aa	ENSBTAP00000066804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N7N8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000133498.1	RRP7-201	593	170aa	ENSBTAP00000078238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8YXZ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000021948.7	RRP7-202	514	170aa	ENSBTAP00000021948.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3S5ZP77	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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