Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: XRCC1 ENSBTAG00000016268

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Description

X-ray repair cross complementing 1 [Source:VGNC Symbol;Acc:VGNC:97328]

Location

Primary_assembly 18: 51,743,919-51,782,676 reverse strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 7 transcripts (splice variants), 189 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097918.1	XRCC1-201	3068	657aa	ENSBTAP00000076327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RVI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000091573.1	XRCC1-202	2993	632aa	ENSBTAP00000080155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S2L1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000135166.1	XRCC1-203	2891	629aa	ENSBTAP00000085678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRS7	-
ENSBTAT00000133244.1	XRCC1-204	2807	601aa	ENSBTAP00000096189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N177	-
ENSBTAT00000079266.2	XRCC1-206	2138	601aa	ENSBTAP00000062708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N177	-
ENSBTAT00000021640.7	XRCC1-205	2075	618aa	ENSBTAP00000021640.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N2F9	-
ENSBTAT00000081405.2	XRCC1-207	2028	620aa	ENSBTAP00000061591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0R4	-

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Summary

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