Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: SPATA22 ENSBTAG00000015763

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Description

spermatosis associated 22 [Source:VGNC Symbol;Acc:VGNC:35180]

Location

Primary_assembly 19: 24,189,914-24,212,643 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants) and 189 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000020932.5	SPATA22-204	1373	364aa	ENSBTAP00000020932.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2TA20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000066501.3	SPATA22-201	2101	336aa	ENSBTAP00000060337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LST4	-
ENSBTAT00000102212.1	SPATA22-202	1216	361aa	ENSBTAP00000098513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJJ5	-
ENSBTAT00000110962.1	SPATA22-203	1093	320aa	ENSBTAP00000076741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZH8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000105149.1	SPATA22-205	958	269aa	ENSBTAP00000084882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SLV7	-

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Summary

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