Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RAB3IL1 ENSBTAG00000015745

.

Description

RAB3A interacting protein like 1 [Source:VGNC Symbol;Acc:VGNC:33655]

Location

Primary_assembly 29: 40,417,001-40,441,946 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 8 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000112095.1	RAB3IL1-204	2698	581aa	ENSBTAP00000102659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000119238.1	RAB3IL1-205	2626	557aa	ENSBTAP00000078641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S0Y9	-
ENSBTAT00000076278.2	RAB3IL1-206	2516	478aa	ENSBTAP00000068180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCS7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000133067.1	RAB3IL1-208	2280	402aa	ENSBTAP00000099554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRA2	-
ENSBTAT00000081951.2	RAB3IL1-202	2155	393aa	ENSBTAP00000056721.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LF65	-
ENSBTAT00000081652.2	RAB3IL1-207	2150	356aa	ENSBTAP00000067232.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAI7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000020909.6	RAB3IL1-203	2118	358aa	ENSBTAP00000020909.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z1Y8	-
ENSBTAT00000069355.2	RAB3IL1-201	2060	387aa	ENSBTAP00000057789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LGV1	-

.

Summary

.

.