Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: UTP6 ENSBTAG00000015612

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Description

UTP6 small subunit processome component [Source:VGNC Symbol;Acc:VGNC:36748]

Location

Primary_assembly 19: 18,209,338-18,250,261 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000144109.1	UTP6-202	2068	603aa	ENSBTAP00000107188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000020740.7	UTP6-201	3291	568aa	ENSBTAP00000020740.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R8I1	-
ENSBTAT00000077907.3	UTP6-203	2361	543aa	ENSBTAP00000057101.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQ64	-
ENSBTAT00000071816.3	UTP6-205	1975	550aa	ENSBTAP00000060702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTN3	-
ENSBTAT00000127538.2	UTP6-204	1915	598aa	ENSBTAP00000100080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TNY7 A5PJN6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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