Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLCO2B1 ENSBTAG00000015596

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Description

solute carrier organic anion transporter family member 2B1 [Source:VGNC Symbol;Acc:VGNC:34952]

Location

Primary_assembly 15: 54,375,442-54,427,957 forward strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000108551.1	SLCO2B1-203	4210	716aa	ENSBTAP00000082465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000020716.8	SLCO2B1-201	4117	708aa	ENSBTAP00000020716.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3S5ZP51	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000077478.3	SLCO2B1-202	3357	564aa	ENSBTAP00000058006.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMA6	-
ENSBTAT00000153138.1	SLCO2B1-204	3108	481aa	ENSBTAP00000106136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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