Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
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Gene: CHCHD4 ENSBTAG00000015529

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Description

coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:VGNC Symbol;Acc:VGNC:27273]

Location

Primary_assembly 22: 58,085,451-58,092,210 forward strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 5 transcripts (splice variants) and 307 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000096360.2	CHCHD4-201	1560	172aa	ENSBTAP00000096376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000148632.1	CHCHD4-204	5835	139aa	ENSBTAP00000107391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000095987.2	CHCHD4-203	1481	132aa	ENSBTAP00000102599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZC3	-
ENSBTAT00000135549.2	CHCHD4-202	1394	137aa	ENSBTAP00000085012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KHZ4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000020635.6	CHCHD4-205	1294	137aa	ENSBTAP00000020635.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z1J2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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