Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHF23 ENSBTAG00000014881

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Description

PHD finger protein 23 [Source:VGNC Symbol;Acc:VGNC:32823]

Location

Primary_assembly 19: 26,948,834-26,953,225 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019811.7	PHF23-203	1945	400aa	ENSBTAP00000019811.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5D962	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000116144.1	PHF23-201	1901	390aa	ENSBTAP00000079036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SA45	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000098948.1	PHF23-202	1755	395aa	ENSBTAP00000093559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TBU6	-
ENSBTAT00000100931.1	PHF23-204	649	157aa	ENSBTAP00000102529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TW18	-

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Summary

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