Gene: CACNA1A ENSBTAG00000014828

Description

calcium voltage-gated channel subunit alpha1 A [Source:VGNC Symbol;Acc:VGNC:26672]

Location

Primary_assembly 7: 12,049,013-12,396,432 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 5 transcripts (splice variants), 278 orthologues, 27 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000126576.1	CACNA1A-202	7551	2502aa	ENSBTAP00000078057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000019752.7	CACNA1A-203	7539	2498aa	ENSBTAP00000019752.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N1E0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000099739.1	CACNA1A-204	7500	2485aa	ENSBTAP00000088292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SVR7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000104905.1	CACNA1A-205	7364	2450aa	ENSBTAP00000083279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SKW9	-
ENSBTAT00000074041.2	CACNA1A-201	7017	2329aa	ENSBTAP00000058208.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LN55	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Gene: CACNA1A ENSBTAG00000014828

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Gene: CACNA1A ENSBTAG00000014828

Summary

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